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bioRxiv preprint doi: https://doi.org/10.1101/2020.01.30.927871; this version posted January 31, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Edgar, R. C. (2004). MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research. https://doi.org/10.1093/nar/gkh340 Elbe, S., & Buckland-Merrett, G. (2017). Data, disease and diplomacy: GISAID’s innovative contribution to global health. Global Challenges. https://doi.org/10.1002/gch2.1018 Kirchdoerfer, R. N., Cottrell, C. A., Wang, N., Pallesen, J., Yassine, H. M., Turner, H. L., Corbett, K. S., Graham, B. S., McLellan, J. S., & Ward, A. B. (2016). Pre-fusion structure of a human coronavirus spike protein. Nature. https://doi.org/10.1038/nature17200 Kumar, S., Stecher, G., Li, M., Knyaz, C., & Tamura, K. (2018). MEGA X: Molecular evolutionary,genetics analysis across computing platforms. Molecular Biology and Evolution. https://doi.org/10.1093/molbev/msy096 Li, F. (2016). Structure, Function, and Evolution of Coronavirus Spike Proteins. Annual Review of Virology, 3(1), 237-261. https://doi.org/10.1146/annurev-virology-110615-042301 Murakami, T. (2008). Roles of the interactions between Env and Gag proteins inthe HIV-1 replication cycle. Microbiology andimmunology, 52(5), 287-295. https://doi.org/10)1111/j.1348- 0421.2008.00008« Ou, X., Guan, H., Qin, B., Mu,Z., Wojdyla, J. A., Wang, M), Dominguez, S. R., Qian, Z., & Cui, S. (2017). Crystalstructure of the receptor binding domain of the spike glycoprotein of human betacoronavirus HKU1. Nature Communications. https://doi.org/10.1038/ncomms15216 Snijder, E.J., van der Meer, Y., Zevenhoven-Dobbe, J., Onderwater, J. J. M., van der Meulen, J., Koerten, H. K., & Mommaas, A.M. (2006). Ultrastructure and origin of membrane vesicles associated with the severe acute respiratory syndrome coronavirus replication complex. Journal of Virology, 80(12), 5927-5940. https://doi.org/10.1128/JVI.02501-05 Zhou, P., Yang, X.-L., Wang, X.-G., Hu, B., Zhang, L., Zhang, W., Si, H.-R., Zhu, Y., Li, B., Huang, C.-L., Chen, H.-D., Chen, J., Luo, Y., Guo, H., Jiang, R.-D., Liu, M.-Q., Chen, Y., Shen, X.-R., Wang, X., ... Shi, Z.-L. (2020). Discovery of a novel coronavirus associated with the recent pneumonia outbreak in humans and its potential bat origin. BioRxiv. https://doi.org/10.1101/2020.01.22.914952 Zhu, N., Zhang, D., Wang, W., Li, X., Yang, B., Song, J., Zhao, X., Huang, B., Shi, W., Lu, R., Niu, P., Zhan, F., Ma, X., Wang, D., Xu, W., Wu, G., Gao, G. F., & Tan, W. (2020). A Novel Coronavirus from Patients with Pneumonia in China, 2019. New England Journal of Medicine, NEJMoa2001017. https://doi.org/10.1056/NEJMoa2001017